YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28976073, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHYRSLGKSG LLVSELCFGT MSFGQQGYWE KIGGLDQSAA QRLVDIALDA GINFFDSADV  60
   61 YSYGQSEEIL GKTLKGKRDK VVLATKVRGR MSQEINDVGL SRRHIIQSCE NSLRRLGTDY 120
  121 LDLYIVHSFD FMTPLEETLS TLNDLVHSGK VRYLGCSNYF AWQLMKALSI SERHHWEKFI 180
  181 SLQAYYSLLS RDVEIELAPL CRDQGLGITP WSPLGAGFLT GKYPRGGKGP RGARRSKEEH 240
  241 NFIQIEEEKA YAILDEVQRI AKLRGVSSAQ VSLNYLLRKS PVSSVIIGAT KPEQLQDNLK 300
  301 TVDWQLSAEE VAALDEISTP PRLYPHWMLE FTRLDRDNPA MIM

Type	Start	End	Confidence
Signal Peptide	1	24	0.81
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	343	0.99