YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|99077994, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILVTGGAG FIGSAVVRQA IAAGHEVVNL DALTYAACLD NVASVAESPS YVFEEADIRD  60
   61 RAALDRIFAE HAPDAVMHLA AESHVDRSID GPGDFIETNV TGTFNMLEAA RKFWIAVGKP 120
  121 ARFRFHHIST DEVYGSLPTD KSVMFTEETA YDPRSPYSAS KASSDHLVRA WHETYGLPVV 180
  181 LTNCSNNYGP FHFPEKLIPV VILNALAGKA LPIYGDGSNI RDWLYVEDHA DALLLVLQKG 240
  241 ENGRSYNVGG ENERTNLELV ETLCAILDDK RPREDGTSYK EQITFVTDRP GHDARYAIDP 300
  301 SRIRTELGWR PSVTVEEGLA KTVQWYLDNE DWWRALQSRK GVGERLGVQT

Type	Start	End	Confidence
Signal Peptide	1	22	0.94
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	350	0.99