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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|52007875, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSNQPVTNV EYVLKDTETV VSKTDLRGNI TYVNQDFVDV SGFSEAELIG APQNIVRHPD  60
   61 MPEEAFADLW RTLQSGKVWS GLVKNRCKNG DYYWVDADVA PLIENGKTVG YASIRSKPDR 120
  121 EQVKEAERVY RAVKAGDKGL GIVEGKAIKC SSLDRCFARR APALKTLLAI ASSSMALIFV 180
  181 VMAVLAWLAT TETNGQFTGW LMGIAGLGVP LAALFAVLSY RSVVIPLDRV RADIERMSAG 240
  241 DLTGRIVAGG ADELVRLMQS LRVLQINMKL LIGQIKQSTD LVGNGAAEIA KGNADLSART 300
  301 ESQASSLEET ASSLEELTGT VKQNAEGTRH ASQLVTSTAQ IAANGGEVVG KVITTMGSIK 360
  361 ESSRKISDII GVIDGIAFQT NILALNAAVE AARAGEQGRG FAVVATEVRN LAQRSAGAAK 420
  421 EIKTLINDSV AQVDAGRKLV DEAGDAMDDI VTSVQLVADI IAGTASASQE QSTGIEQVNQ 480
  481 AVAQMDELTQ QNAALVEQVA AASETLQDQA VKLAAIVDTF KLVSGRDAGR RPGAGRALAS 540
  541 GTNTALSGGA SGAMQAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle