YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74057912, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDMQFLQDNW MLVALALISG AMLVWSFVGG SLSGVEQADT LKATRLFNDD ALVLDVREDK  60
   61 EYAAGHIPKA KHIPLGQLQS RLSELDKHKN KPVLVTCRSG NRSAHACRIL KKAGFESVYN 120
  121 QAGGILAWER ANLPVTQK

Type	Start	End	Confidence
Cytoplasmic	1	9	0.45
Transmembrane Helix	10	31	0.77
Non-Cytoplasmic	32	138	0.63