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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49125072, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGLSAAASV FAVIQLTGSL VELCGGYIQQ VKHARDEVLT LQRAIVGLQG TLQDLQNLVQ  60
   61 TNNGNTLPTS SRLVGNITDC LSDLRGLETR LDPGKRKKLM RKVGWRALKW PLKRIEVEEV 120
  121 IQNLERYKTS FLLSLQVDQS SLMVGRAQDM DFEKLEGVME AAFESFSDRD EVQCLQGTRT 180
  181 VLLQQIMDWA LLPSQKSIFW LKGMAGTGKS TISRTVAESL KNINHLGASF FFKRGEGDRG 240
  241 NAKKFFPTLI RQLILRIPGL RPGVQMVLRD NPDIASKSLR EQFEKLLLQP LVILDQLGRQ 300
  301 PQTAVIVVDA LDECEHDQDI RAIIRLLPSL QKAKSVHLRI FLTSRPELPI SLGFSEIRDH 360
  361 EYQDLALHEI PEEVTEHDIY LFLQDRFVKI KRDKNISEDW PGDEVIQKLV EMSAPLFISA 420
  421 ATLCRYIESS KMEPKLRLAE LLKDQAKYAS RMDKTYLPIL TRLLDDQESD EFEQQQLLQE 480
  481 FQAISHLQKD ICSLESPGTR RADINPQDIR QYLPPELRYS CRYWIHHLKE SQVSSSEIED 540
  541 VRLFLQKHFL HWVEAMCLLD ILKQGNNDSL LADFLHDAKR FVLKNCQVAD EAPLQIYCAG 600
  601 LVFAPQTALI RSNFSEDLPS WICQLPKVNE KWGAELQTLE GHSNSVWAVL ASGSDDETVR 660
  661 LWDPATGSLQ QTLEGHSGWV LSVAFSPDGR LLASGSFDKT VRLWDPATGS LQQTLRGHSN 720
  721 WVRSVAFSPD GRLLASGSFD KTVRLWDPAT GSLQQTLRGH SDTVRSVAFS PDGRLLASGS 780
  781 FDKTVRLWDP ATGTLQQTLI IKGTVTELQF SQDGSYISTN LGSLNIQSRC GSRNCAPELI 840
  841 NRDACQAFNA AVIGGEVPN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle