YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MMM1_EMENI
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFQQGTPGP PVELCSTFTD HDETVSSLSF TQGFLLGQLS VVLLIGAFIK FFIFGEAPPP  60
   61 PSRGLRASTH RRSNSIFSQD APPPRSLREK PSTSNVLRPV PSSATNTRSI LRKTYYSAIP 120
  121 PNPSSKHRIH HSSHQPESLD WFNVLIAQTI AQYRQTAYLL KDSPTSSILH SLTAALNNPE 180
  181 KKPSFIDKIT VTDISLGEEF PIFSNCRIIA VDDPMSDGGR LQALLDVDMS DDNLSIAVET 240
  241 SLVLNYPKPC SAILPVALSI SVVRFSGTLC ISLVPASTPP LHTPSPMPSP PTAGAQPAAG 300
  301 AQPTDGGDIP PKSSSKSNIA FSFLPDYRLD LSVRSLIGSR SRLQDVPKVA QLVEARVHAW 360
  361 FEERVVEPRV QVVGLPDLWP RMGRTGVRTG DESETGSNTA SRPAMSVDMS SPGHLQGDGG 420
  421 NHEEELRFRG LGPRPPLPFD AVSRTSSYQV ETGAPRSPSL TRERSLGDDF HMPGSMPEAP 480
  481 GAQ

Type	Start	End	Confidence
Cytoplasmic	1	33	0.63
Transmembrane Helix	34	54	0.86
Non-Cytoplasmic	55	483	0.81