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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67516381, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAKCKTRLA NVLMLLLAAR TVCSAPTPSQ SSGVSESTQY PPSTRGARLL PPETQGFYPT  60
   61 KLEREGHELE QPTPTPDESF VGLNDLLDTL GQPESLLNWL LPNPDEPTDV PSQPPAAPTS 120
  121 EASSTPLVAA TPVPTTLPAT HNIIEQPTTV SSVPSSFEAT TVTTSSSDEN SPVVSTFTTH 180
  181 IQDVFVPVGT GPIPAAITSR NDHPVRKNGV NSSNPIETNK FHSALFLGTQ TNATFTHPYT 240
  241 LAWAKGSGNL SSFGMAVSHT ELNLVASGPT NSQLPGNPIS YYINPIGIQS IILSASEFGP 300
  301 STVLTAENPK SFSADAVLQP QAGSARRLTL PVLQGMAFVT GIYTQLQPVV QSAVHFRQVV 360
  361 TAGSPRAGIF KYRATLEDNS IWLIYAIPDN GQDPNFQLVS TTDLRGPSGW SGTVQVAKNP 420
  421 AGSSGESLFD NSAGVFAVEA TVSGSVDGHT GTYRLAWAKA GKETQSTPLM MFALPHHVAS 480
  481 FDSQTSARAV NITLRTTTKG MARAVIGEYW TMTEPDLPTN MGFAPWVLAT DSSPQLSAAA 540
  541 QAVIRDVAIT ELQQDIDGQT NLNSMYFSGK ALSKFATIIW TVDKLLNDHA TAAPALERLK 600
  601 QAFARFAQNK QQFPLVYDTV WKGVVSSASY GGDVGADFGN TLYNDHHFHY GYFIHAAAVI 660
  661 GALDPSWIAA NRDWVNTLVR DSGNPAYNDP LFPFSRAFDW YHGHSWAKGL FESFDGKDQE 720
  721 SSSEDSMYAY ALKMWGKTIG DASMEARGNL MLGIMRRSFH DYFLMESDNA NHPANFIGNK 780
  781 VTGILFENKV DHTTYFGSNL EYIQGIHMLP LLPMSPYIRS QRFVREEWNA IFASNAAAPA 840
  841 DGVTGGWKGI LYANLALIDP AASWRFFSQS NFDYSWIDGG ASRTWYLAFA AGRITDIAGG 900
  901 AKLTSWNAVA CASALLRDFI TYTSRRLLCR VVKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle