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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49084854, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTTTQLPNG QSFTVTPVFG GVNFKSNSLN QRGSLLLPGW NVVLGTRRRP EDLSDGDLTD  60
   61 VERGRARPME KKPQVTRFTV PTLSSDELYI SYIVNPPDSD YKPVSSPTRQ IAMMLWVTLY 120
  121 WYFHEPEPEF QLYTEASANT PFAGKPKGDW RVNIRREGIF TGHNVLQKLE RMGLIACDDS 180
  181 SVGPDPEDRD SWSHMFVSRR SFWQLDPRLY LFTLSPQSFA HSVGGTAFGR IASPTRESLY 240
  241 LGEPNGRPRS AGPGSGRYMP NEGPFASHSH LPTFFPPPPC QFTFTNGVRH PIRQKPPHQG 300
  301 EVFYVRYIPS LGQYLSFRVP YLRSPRDHTE QLSSEPDTPS DLEYLHKWMN EPRVDAAWGE 360
  361 AGPISKQEEF LRQNLSKRHS FPVIGCWDGH PFGYFEIYWV KEDPLGSLIG GTDNYDRGIH 420
  421 VLVGEQKYRG PHRVSAWLTS LVHFCWLADM RTQTVMLEPR VDNKKMISYL ESAGFYKDGE 480
  481 VTFPHKQSAL MKIRRDTAWT GRLTFLDASS IRSVPRTEGS WPAIMLPFVI LASSGNLVQR 540
  541 DSDNLLNRPQ ELDEPLLAVQ IGGIVGAYVI FVAIILTLLL VVGRRLRRTV QSSNYTLQVE 600
  601 MMKPKHPPIA ASATATKSNA AFNSVDPSPV TPTNKSHGFR SWTSLTKGQH SRSNNGSVAT 660
  661 IDHESVVAAD RRRNQDQMEM LYAAVMEHDE RRAAATASPV SPTDDVSLKD LSPRSPTSYQ 720
  721 NANPFSDYAA RVPEDKPLPP HPHQQPQPQY HHPPAPAVTA ASPPTSPGGR SRTSRLSRIS 780
  781 NLSLFHSNRE GNNASHSQSG GSRIRSPRFT GRKHGHTVGI NISSPLASPD PTSPHSDQIP 840
  841 LSPRFYNPTP PPLPPKADGP ITRINTNNTT ASQERQHRTP VPPPLNLQAA TPTSAKAGRS 900
  901 SSSLPFREAY PQLLSAPPTK TTILERPEKQ LSGPRTGLPT PYSPYMPFTP LTPLTPSRIV 960
  961 TKKQRKREGK ENGLRALNEE DAVRSEDDMW GY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle