YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67516315, gi|...
Protein type: Transmembrane
Type Confidence: 0.67
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKAIFYSKF DTQEGPKVVH QVPDGAITFS NTAASQPPFF TFSDISFFVI PRQELCGNLI  60
   61 QVCTNGYRIL GYPICMKSPR YDRNEFIFNF CLVLAEEEDF SSYKSVVQKL ADLMHGLEEQ 120
  121 SGFLSRDHSK SGEGKVYSLC ETLMEDLNNY CECMIPIDEL NTLNIKLFPV YPNPPPVRAW 180
  181 QVPLFTVRYQ AFLDENWDLT LQRIVPHING VNSIRIISLL ADTDFSLTCR AIRHLLYYGC 240
  241 IFLLDIFSFS AIYAPTALFS STIAADENMQ RECARYVNTL FASPMTAPTT PAAIPPGHDK 300
  301 DAVWPPVGES MPSRGTDSIA TSTSENISPT ATPSPANTSA LISSTRSPTD PLAMSTNSIG 360
  361 NREVVDGVGI VELYASLKQG QSVKQWYLQH SRQLAHIDIR RFITFGIIKG FLYRVHKYAI 420
  421 ATGNPAPQFK SGATTPRSHY QHSGPSSRGP GTGANSPYAS SAGDDPPPIA QHQQHHHNQH 480
  481 HHRNHNYRSE DGKDKDRASV YSGSRSAPLY DDDDDEDFID NKDLAKYLDG MHCFDQICTE 540
  541 LEISERELTA RLKRYQGEVL IVHR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle