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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45358866, gi|...
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTIPPIKRL GTKLIIYSII TALIPIVMLG AVSTDTINTE MTKQAQEKIN DDLNTAESVV  60
   61 NLKLDKISSL NKYIISNDNT ITSLKNNNTA ELKTLAISYK NTSAPDFVVF FDGQGNVVAR 120
  121 SNSDVTGDNS YEDLFKKVVN STGYTSIEVL DKDSIKYENV GELVNIDIKG TEDSINYSDS 180
  181 VQDSAMALVS IEPIYDKNGK LLGAAMAADI LNKDYSIVDT VKDASKDATT IFLDGVRVST 240
  241 NVQDNGGRAI GTLVSEEVYN HVVLDGKTYY GRAFVVNEWY LTAYEPIYDS DNKIIGMLFV 300
  301 GTPESKFLAL QADVRNQTFV VGLIGLLIAL IVSYLINRGI IKPLEQLKQG AEWVSNGRYD 360
  361 QKVIVDSDDE FGELAKAFNK MATQINISDD KLKKHAEELK ISYNELKELD KLKSELIAVV 420
  421 SHELRTPLTS IKGYVELVLD GTMGAINDSQ KKCLQVADDN IVRLRRLIES MLDLSKIERG 480
  481 ELEMYREKVN LRSIVCDVIE YLKPLATEKN IKLNKEVEDI AIEADKDRIT QVLTNLIENA 540
  541 IKFSPANESI LVSGVLEDEH IHLKVTDRGA GIPKKDMEKI FNRFYQVDSS TKRKKGGSGL 600
  601 GLAVCKSIVE AHKGSIWVES ELGKGSTFHI ILPISAKDQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle