YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45357768, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKSSGIII GLITAILLSA MLLFAGCVSD SSSAEETTTI TVSAASSLTD AMTDIAAAFE  60
   61 EDNPNINVEL NFAASGSLRQ QIEGGAPVDV FASASKKHVD ILEDENLTSA GSRTNFASNS 120
  121 LVLIVPAGNP SNISSVEDLT SDAVTKVSIG NPETAPVGKY AKESLTDSGL WDELEEKMVY 180
  181 GENVRQVLTY LETGDVDAGF VYMTDAKIAK ENSIEIITTV PTVTEIIYPV CIIDSSENKE 240
  241 EAQVFLDYLT SETGKQILTD YGFTAEN

Type	Start	End	Confidence
Signal Peptide	1	34	0.94
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	267	0.99