YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|40747028, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLTKEEED AHYREVLKGG SFGTVLGLIG GYAGVLAASR RYHTIRNLTL PMKAFLVTSS  60
   61 GTFVGIIGAD RSSRSFEAAQ NQNRQWYENR EERLRAQELR GMSFSDRALA WAREERYTIV 120
  121 FSTWVASMIG SFALVGRNPY LSGPQKLVQA RVYAQGATLA VLIASAAFEI SERRRVRREL 180
  181 DAKSASAKAD SKLSNNTGED TELWKDMVAA EEQRLKNKHH EQEQEQKSEE KKEKQK

Type	Start	End	Confidence
Cytoplasmic	1	18	0.85
Transmembrane Helix	19	39	0.89
Non-Cytoplasmic	40	48	0.75
Transmembrane Helix	49	69	0.82
Cytoplasmic	70	116	0.96
Transmembrane Helix	117	136	0.94
Non-Cytoplasmic	137	151	0.78
Transmembrane Helix	152	170	0.91
Cytoplasmic	171	236	0.96