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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40746994, gi|...
Protein type: Transmembrane
Type Confidence: 0.76
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMTPLRFARS ALRARPAAFR VPLQRRGYAE AVNDKIKLSL VLPHQTIFRS TDVVQVNIPA  60
   61 ESGEMGVLAN HVPSIEQLKP GLVEIVEEGG ASKKFFLSGG FAVVQPDSQL SINAVEGFPL 120
  121 EDFSAENVRA QLAEAQKIAS GNGSEQDIAE AKIEIEGSLA RQFVSLGVQS LLFSPTHRYE 180
  181 TTKYTFSAMA EELPTNPPTS FSHEFGLMGD ENYLTGYLLE TPRRWHVKTT LSERQGPTSP 240
  241 SLIQNRSRTL DRFSDGDDYK RLLFTFPMLY SDSTLERDPF FDGRGMPLNP NNTPISRSGC 300
  301 QSETGSIGKD KQDVHSPAKY DKHVNQSSDA VAHGDDPLTS HSNSREKVSK PPKPPKPPFL 360
  361 ANINISTQAD LENIEPSLRA VPQQRADDRR PMLETLYRSL PSRVASRKFD QPVEPAVAEL 420
  421 TPEKHPARLK QSWNTGRIVP GRYFPRPFTP RELEVLGIPL NNPGMPFPAP IPTIDKLPLR 480
  481 RGIICFDWKL ADQYPNDIDS FPATEKKHTA LPQGSWKTLR RIPHKLPSPR QLTQTALYYL 540
  541 TPWKQFTLKQ NPSLRMTITI PFASKSETFA VEQDQVLIPG LVDGAYVLQF NLVLPLLLVY 600
  601 QTTRLTAAIR RCMSLRVAAI AASTVRAILV TLIRWVLFVF RVEVTVELRQ FHEYTKCTAY 660
  661 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle