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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49084314, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADSENPQAA SNSASSLVTV LVPSLVVAGA MVLIFVILRR SERRMYMPRT YLGVLRDSQK  60
   61 TPPSSTGPLG WIKDMYKLPD EYVLQHHSMD AYLLLRFLKI ITMICFVGSC LTFPILFPVN 120
  121 ATGGAGKQQL DILSFSNVSE TKYARFFAHA LVAWVFVAFV FFTVTRESLF YINLRQAYSL 180
  181 SRSYASRLSS RTVLFTTVPE EYQSVEKIRF MFGANKVKNV WLTTDTAELA EKVNDRHAAA 240
  241 IKLEAAETKL IRMANAARLK ALKKNRGTGE QSTAPEATED DGESGSVAAR WVRPKDRPTH 300
  301 RLKPIIGKKV DTINWARSEI ERLTPEIEAL QTQHRAGEAK LVSSVFVEFH TQADAQAAFQ 360
  361 SVAHNLPLHM APRYIGLEPT QIIWSNLRIK WWERIIRYGA SVAFVSAMVI FWAIPTAFVG 420
  421 SLSNINNLTD KVHFLRFIND VPDWILGAIT GLLPTILMAV LMALVPIVLR LMAKIGGAPN 480
  481 LAAVELSTQN FYFFFQVVQV FLVVTLSSAA TSVVTKIVSN PTSATSLLAN NLPLSANFYI 540
  541 SYIVLQGLSF SSGALLQISG LILGKILGRL LDNTPRKMYS RWSNLAGLGW GTVYPVFTLL 600
  601 AVIAITYSCI APLVLGFATI GLYLFYFAYR YNLLYVSNAD IDTQGKTFAR ALQQILVGCY 660
  661 LLVVCLIGLF AIGTGTDPIA LGPMILTIIL LVTMIIYHVS LNAALDPLIN YLPRNLEAEE 720
  721 EALLSQETNG AKDEYDGSAS PSAADGQTAD NVDSAEKGLT QANPAEPKTN FLTKYLRPDK 780
  781 YSGYRQLRTL VPNGTETVSY PPEVERNAYY HPAISAQAPL LWIPRDEMGI SAQEVAHTSR 840
  841 VIPITDEDAW LDEKNHIVWN VEKGVPPIFE EKIYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle