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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40746747, gi|...
Protein type: Transmembrane
Type Confidence: 0.56
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAPSTTRQ WGVTPPISTT LPTAQELSAN DDLIAELKLQ NNFESPAETE RRKQVLQLLQ  60
   61 RVTIEFVKVV SRKKGLSQAA VEAAGGKIFT YGSYRLGVYG PGSDIDTLVL GPKHVVIDDF 120
  121 FAEFPPLLES MAPQGAVEKI TPVPDAFVPL IKLELSGISI DLIFARLIVP SIPLNLDLKN 180
  181 NDYLRGLDEK EVRSLNGTRV TDEILELVPQ QKTFRLALRA IKLWAQRRAI YSNIVGFPGG 240
  241 VAWAMLVARV CQLYPQATGS VIVGKFFRIM NKWAWPQPVL LKPIEDGPLQ MKVWNPKIYH 300
  301 GDRFHLMPII TPAYPSMCAT HNISMSTKAV ILRELQRGGD IVDKIWAKQA TWNDLFKKHS 360
  361 FFTNDYKYYL GVTASSRTKE AESVWSGLVE SKVRHLVGAL DRKPTIAVAH PFPKGFERIH 420
  421 IVSNEEEAEA VKNGSLKYQD KGTKTETTDE IKDAAHQAAA QSGREDTDVP GAANNTAAND 480
  481 GRIIYTTTYY IGLELKPVEP GASRSLDISS DAQFFKSMCT SWPGYQPGIN DLSITHVRNY 540
  541 DLPEDLFQEG EARPTRPKKK VVKKVPAGGQ KRSFDSVDDP SNPAAKRQVT DSYATATAQP 600
  601 A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle