YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67521680, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTSFRDSV NALGWSRREG DTLANTNSTP FFSRLHSLNP FGQGDGYLQL PTHEAPGAPL  60
   61 PAPSRREEED TFFALSRWDR MLIFSACNLG AAVCFVICFF LFPVLSLKPR KFAILWSVGS 120
  121 LLFLLSWAVL MGPMIYVRHL ISGSRLPFTA AYFGSIAMTL YFAIGLHNTF LTLLSSIFQL 180
  181 AALLWYIVSY FPMGSTGLQF MGRFGAQRVT AWISS

Type	Start	End	Confidence
Cytoplasmic	1	81	0.95
Transmembrane Helix	82	105	0.92
Non-Cytoplasmic	106	111	0.87
Transmembrane Helix	112	137	0.86
Cytoplasmic	138	147	0.77
Transmembrane Helix	148	167	0.91
Non-Cytoplasmic	168	180	0.62
Transmembrane Helix	181	202	0.82
Cytoplasmic	203	215	0.88