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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40746621, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQYLPEKDYE LPRLDLLTLL FESQLSLTTE STILHAEAAD PTNHITKAQA RTITKRLAHV  60
   61 FRSEFGIGAD GPGKDAVMCI SANQVLLPAV FCGIIGAGGV YTAASTALTA SEVSKQLRQS 120
  121 RSKVIVACPE NRAKARDAAR ECGIPPDRVL VLESMGHRRL LCQVTFLSTA PPVYHGIVRS 180
  181 DRVTDQFKTL VRAESGAAPL SLELQEQAEK MLGCTISQRW GMTESTGSVT TMPWGQSDNT 240
  241 GGISPLLPNM RLRLVDERMR DVRSGDEGEI LLKGPMITKG YFENPEATAE AFTTDGWYKT 300
  301 GDIGVYKDGK IIMVDRKKEL IKYKGLQVSP VEIEGFLLTH PGVADVAVVG ARDPEAPGNE 360
  361 LPRAYVVIKA GSSVSEAELK DPALELTKGL EQLDPQLSNQ RSTQSSSLRF PKMHTTLLSN 420
  421 SMRGAALCTR VSSTTLNPVT LQTSAIYQTI SLKNQTRPSS TSTVRFLKAS PTLRTSSARP 480
  481 QAQIATSCIN AKNTISVRSN STTSTSAREE AAKLDWNSYF KLRASRRRYT LASSIVSSAV 540
  541 STVVGVQVLS SQNLENLGAQ VMGLDPFVVL GMATAACGAV GWLVGPFLGN AVWGLVNRSY 600
  601 KKAFLVKEKE FFDRIKRYRV DPSSNSMTNP VPDYYGEKIG SVQGYRQWLK DQRAYNRKRR 660
  661 SFIK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle