YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|40746535, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIFSSPLIS AVSLLPCLSF AVSFDCSSIH VDNYNYNLKA LGGVHEIYHA EQVGDLIVNT  60
   61 TYVLNLCNTL KGASIRGNLK CGTSKNICGF NYTYGADGAT ENDFAFPIVG LEPMGQGAKD 120
  121 AEITRLKKED TEKEGLRVKL SGGGEYPEPG SKKKKKAGAV IEFECDPGRS GLEGLVKEDT 180
  181 KRLLRAREEG LDEGEGDGEG DGNGEDKEPF YDGSDPDRSL QYKSFGKADD ETFFLCAAAY 240
  241 LIFGSWLNYN RYGARGWDLL PHGDTLRDIP YLFQDWLRRV VNTFQGAGSR GGYSAV

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	296	0.98