YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|40746493, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLYYSLVFC LLVLEMGVFM GLIVPLPFTV KRKLFTFISE SPVIAKLQYG LRITFIFILI  60
   61 LFIDSVNRVY RVQLEVSAFS KEGGNVGGAA LGTDRMEVQA RKFYSQRNMY LCGFTLFLSL 120
  121 ILNRTYTMIL ETLRLEDRVK LLEGNKQAGG KDSARLAAAG DMGEIGRLKK ELEEKERDIE 180
  181 TLKKQCEGLT REYHKLGDQV TGKKSDDSVE KKDL

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.53
Transmembrane Helix	7	29	0.92
Cytoplasmic	30	48	0.54
Transmembrane Helix	49	67	0.82
Non-Cytoplasmic	68	214	0.55