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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49085692, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNLWLWHFL PLVLLFLCTF ALDTHNEYTL SDVTRGSPHP SGDTSNPDTP PNERVQYALR  60
   61 ILREAKIPVI PSAGKPSGFI GYTWYYAQEA FRILFMNGPP SSSGAQRKIH PSIARAVDAL 120
  121 KIAAVEDHDP DAMFLLAEMN FYGNFSHPQD FKQAFHWYKS LASWDGNSTA QYMLGFMYAT 180
  181 GIGGGVERDQ AKALLYHTFA AEAGNTRSEM TLAYRHHAGI GTPRNCDEAT YYYKQVADKA 240
  241 IDYYRSGPPG GHSMVRESYR WADEEGGVYG EGASASSSGP SALRDGSSST EASLEDVLEY 300
  301 LDLMSRKGEV KATFSLGKMH YEGTKGLPKN YKKALKYFKQ VTKRYWNKDN SLNPNHPAGI 360
  361 EKLASKAAGH VGLMYLRGEG VEQNFETAYT WFKLGLANGD ALCQHQIGLM YLHGYGVQQD 420
  421 AFKASSYFKA AADQDYPAAE TRLGALFLDQ GDVTTATKYF ELAARWGWME AFYYLAELAN 480
  481 NGVGRQRHCG LAASYYKMVA EKAEVIHSSF TEANAAYESG DKERAFIPML MAAEQGYEHA 540
  541 QANVAFILDE QRSLLPLERF LPGLRKSQPP LLKNAALALI QWTRSAKQAN VDSLLKMGDY 600
  601 YLSGNGVDID TEKASTCYHT AAEAHFSAQA YWNLGWMHEN GIAVEQDFHM AKRYYDLALE 660
  661 TSSEAYLPVK LSLLKLRARS AWNRLTNGKV NSIREDDEPK PRRTFSEWIA AFIENDEEEE 720
  721 ANYRAQLYKH GEEDDDDILS GSEHHRLDDH EDGYYDDLEL DIDESILEGL IILSLAATLM 780
  781 VLVYLRQQRN NRERPNDDQA ANAAGQANAN NRGFFPRPGD PEFAQWVAGG LRFRHPPSTD 840
  841 CVPPFHLLIT AEMTSSIPNG KRRRLDQATT TLSRPFKSPL RRPTPAVKDE AASSKIEGMA 900
  901 ASSSFIKTIT PDGQDNSTAL STSSTTNAPP TPPPTRKRTF PGQRLTPARK PVPSDPEIMD 960
  961 LQKRQRELQS RLSSLRSDLD TVQQALRIES SSNDEELEVL IMKWKKVSQD AAEEVFSGAQ1020
 1021 ERISRMGGVK AWRERTNNND ARWEQEEMET WFGNVDADAL DMDEDELQAR KAELREEMER1080
 1081 KNVKGSSDDS EEFTMDMMLK MLNIELTTIG YDKANQRWIT G

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle