YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49086186, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMRLFVVPI STRRALIYAR LLRKDVSKER SILDRVTDKA AETWAKWEEA DKGWKTWVVS  60
   61 WGNRVQQRIP YEEWGLKSIP SLNFQRRIDE SHGSNKVEVL FPGNAIKEEK LIPMLHKLSK 120
  121 ERQELHKRRM WWSLIAAPFT APIGLIPLHL QFLVEKDLLK PISYSGLVEL YAKRVSRTLE 180
  181 ESDREDPVEE MVEDVEKSDD KILLRMKDAK KLATILDAPG LALEAERAIA QVSEQLKQPH 240
  241 STQPGKDSEK TTEKKQQ

Type	Start	End	Confidence
Cytoplasmic	1	129	0.92
Transmembrane Helix	130	150	0.89
Non-Cytoplasmic	151	257	0.97