YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67521792, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.63
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEPRARAAR HKGQMNFPSE CWFFLSSLRL LLLAYGDPAP HPSFPSEPLP ETVRVLDEIV  60
   61 TDFVLEMCHG AAQHANYSRR QKIKVDDFRF ALRRDPNKLG RVQELLRMER ELKEARKQFD 120
  121 QNDDQVGNLK DAAGKRGLDD IGDGGDGKKS KGKGKKGARR DSDATEDTSM AKKRKHPALG 180
  181 CAVAHHGLPC LADYAGHHLA LRYQTRRQGK VWLIQVTLNI SRLNLGSQGK SIEQELAQCC 240
  241 RGGSLLIDDR LDVSRNPVNH TKNLLDRTLQ GLNIGEEGGG TLL

Type	Start	End	Confidence
Cytoplasmic	1	20	0.59
Transmembrane Helix	21	37	0.62
Non-Cytoplasmic	38	283	0.99