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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40746215, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRKGIEVPS VPQGQAAPRT KPRPPPPPFY LPLNVTLYVC LISNGIAAFL APIQDCDEVF  60
   61 NFWEPTHYLD HGYGLQTWEY SPVYSIRSWL YITLHGIVGK IGSLVVGSKS SEFYFIRFSL 120
  121 AMICAACETR LYSAICRTLS PRIGLLFLMI VAFSPGMFHA SAAFLPSSFT MYASMLGLAS 180
  181 FLDWRGGQKT AQGIMWFGIG AIVGWPFAGA LLLPLLFEEI VIGYLSKNMQ KVFSDVLNGV 240
  241 LRCLAILAAE IAVDFAFLRK LTVVPWNIVA YNIFGGEGRG PEIFGTEPWT FYVRNLLLNF 300
  301 NVWFIFAVSA GPLLLLQAIF RARATNSETL LRTVTLLSPF YMWLGIFTLQ AHKEERFMYP 360
  361 AYPFLALNAA IAFHMILSYI GSSNPKELIG RVPAKLKLAG VMSVILLAIN SGLLRTLGMI 420
  421 TAYNAPLKVL QPLEQSEIAQ PGDTVCFGKE WYRFPSSFFL PDGMRAKFIQ SEFRGLLPGE 480
  481 FQDAPSYSAL LEGTSRVPEG MNDRNKEDTG KYTDISQCSF LVDSHFPGRE ATALEPNYLQ 540
  541 DKAQWDEISC ASFLDASQTD LLGRLIWVPD LPIIPDQFRR SWGQYCLLRR RTSDSESEVL 600
  601 SIALDVEWTP SNFKRPTASP YPNWDVHTTK PIPYRPFRYG PNYFITMGLR SMKWDEWIEL 660
  661 DNHYFRYHRD KSRRLKERGD KCCATAPEAW DAAVELLEEL YNTPASIDPF NTSYLPERYP 720
  721 SMFRKTPTGL TNLLTNETFD ITQRPLPEDP MAMCARLIQD DLALMIEKPD GEYYLLAGAI 780
  781 LLAGFWRLSD KYGMRLSEIH TSGDVPGYKE KLERGMMNFF RRLKVEDPVV RNNYFIQVDD 840
  841 NLAWSHSIGS EDADVVSWNT AQKDKAIEHH YFRSERQSLR RLPRTGAVVF TIRTYFEPIT 900
  901 KIVEEPYVAG RLASAIRSWG DDVAKYKGRE KYGDVLLEFL DRKHAEQVAA GLDLEREDKV 960
  961 VGLHRNTKRN AISPFSPTPI LIYDESAQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle