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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49083972, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVVQRVRKW LPSTPSLPLD DSPYEKGHKS SRFAFFRRRI RLKGNSSVSI PLGFVLLFPC  60
   61 IVIVLILLLF VRHPSSPGGI LIPAGTPPSI RKISEKYDKV FATGCQPINT DTPRANAAFV 120
  121 VLARNKEIDG VIQSMKSIER HFNRWYRYPY VFLNDAEFDD NFINTVKNYT SAPVEFGKID 180
  181 ETMWGYPSWV DHEVAKEGIR KQGDAAIMYG GMESYHHMCR FYSGFFYKHP LLLKYEWYWR 240
  241 LEPEIKYFCD ITYDPFLKMA EANKTYGFTI AVKELRETVP NIFRYASAYK RKNNIKSQGL 300
  301 WEMFLEPREE PNPEEQQPET LPEEILITEP GEKNEIDPET MEGESYNMCH FWSNFEIARL 360
  361 DFFRSKEYED FFEMMDRSGG FWMERWGDAP IHSLAAGVLL SPSDIHYFRD FGYRHTTIQH 420
  421 CPANAPARQL PRIPYLEMTT EDEKERIEED EYWANPDPVK ENGVGCRCRC DTDIVDVEGK 480
  481 QGSCLAEWVE VAGGWASP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle