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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49087048, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLKHRDYAL AGLGGFIAWG FAIHWLPVLR YLGYALALGA FLASSAIFGL VLLTTRNLPS  60
   61 SKFTRPKTLP VAFVSRRHWK NEVQRYGKRA EYHAESLYPE SFIVSESLNE ILSFITRDFI 120
  121 ASWHRSISSN PAFPNEVDKV IRTAVGNLRS RLLAEDIVSL VVSRIFPILT THLKEFDIAE 180
  181 RSVRGRNLTR NVTESEELDL AIAKKYRDGQ LHPAAVLSLS DQKAVEQEYL RKVTVGLLPQ 240
  241 LFPANVLNSR IVSVLIREIL SCAVLFPLVS VASDPDTWNQ LIEAYGRTTL QDRKTVRKLR 300
  301 AALDEHASPA PKAKRGHPFP RLSPNDSERA FERFVRTIRR CNNLSDARRF RALIASQLKR 360
  361 ESMVEGQDPV YLRRLETGKR VLDQKVAKLS APNDQTSHVA AAASHFRRKS SSATQEASLV 420
  421 DVMHDASGLS YFMEFMDRQH LMSLVQFWIV VDGFRNPLED DFGDETSPSS NTWTTADRND 480
  481 IALISATYLA KPELKVTEES RQVVKAFLSA GKRATPEQYR KARTVILSTQ SAILEELQEV 540
  541 YFPKFKQSDL YWKYLASDDV SHGSAAMSSP SSQQSLVGSL DAQERRPLPL LLNRTASQPG 600
  601 PKAKVDLRRA AISSNDVSGL GKLFDGEEST RRSMDSERSA PLFDDDYDTD PLALSSQSLG 660
  661 QDTPNGGPEI SERRVIENME AALNDIITNV PKNGRIEELS TSDIHQGSPR NSNESSRVEG 720
  721 RGDDKLKPSI ASLGLVDGSS RRGVFDDDLF PEQQNYLEDE YEEPEGTAGK YSALEVHEAA 780
  781 PGDLGLTEAI QALTADIEKL GSQEAVVDTL TRKAELTNNT AELRILRKSK MSIQRELHRK 840
  841 EMQRQQYMIQ ESDNSLYGRS TVRIKSIVVG KEEDGREFAM YVIEVQRNAG EQMPAGSWVV 900
  901 ARRYSEFHEL HHQLRTRYPS VRQLEFPRRR MVMKLQKEFL QKRRLALEAY LQHLLLLPEV 960
  961 CRSRDLRAFL SQRAIIPRDE TPRDGETKDL VTRIYNSVAD GMDDFLGNFG VLDQLSIAGQ1020
 1021 NLISAATNQQ QPNTSAVSTD SGLTTEDAVT TAEAEAELNA FEDRELEPFI KPICDLFLET1080
 1081 FELNKGNNWL RGRAVVVVLH QLLGGTIERK VREGARSLFQ DEHLLRYLTL AKDTLWPGGV1140
 1141 LRENRVRTAS ERLKSRTEAS LVLATLVPEL AGNVVGRANA QAAARRIFAT LNNQRLNAHL1200
 1201 IFTLLDEIVL VLFGGEKVTG RTRLLQDDKV FSSFDGLDGL DTLSSGGMSS VTNND

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle