YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49088620, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPSETSILS NFLLSAASLP QIMSLKQFTG LFPKRLQSHP HIRVLYRELQ QLREQDMDIV  60
   61 NENIDKEVRL GDAQKAELRK SIVKTGVDGS GANDQREMDM DFQLFGPTSA GSDEQHSVSS 120
  121 LLSAMEAACS DIEREIAGVD GEAASLLSEL NSTVGDLSDL RYGKMHGSVG ATDAEVVSEA 180
  181 IRGLDNLEDA CSPMPSISLH PRASSRNNAH NPLPQLLQTP SGLALLELQG TINLPFQENL 240
  241 DAENESTDFN SPSTYETPIG KLMFPDYSQN AKDDTSWMKR AYLYVGRYQR MTGEVKKLPK 300
  301 PLAIIQRRQT DGADDAREQL EVVEIVKYKL IFKNRPEPVN DV

Type	Start	End	Confidence
Signal Peptide	1	24	0.82
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	342	0.99