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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PALF_EMENI
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRATCSCVM SVNPLSAQTS ASPLSRNRSS LLSKFRTQLG QRNRAITDFY IEPDDPWRSY  60
   61 FPGDVIKGTV SLTVVRPVRI THLVISLHGI VKVFKNNVPA GETPPDVGSL GPGRGRRGAE 120
  121 YLGNGVATLF EDEVVLCGEG RLKEGIYKFR FEMSFPPYPL PSSISFERGT ISYMLTSTLT 180
  181 KPTTMNPTLS CRRRINLLEN IDIAAFPAPK PRVVTLEPIS KRSKPKGKTK AAGFDAPDTA 240
  241 SLEPSASGGI TVPEHRPPLS PAPSNVSSSS RLSNSSQSFQ IVTDPGSTAS SGVRNSEARS 300
  301 NTPSVTDGII TAKAEVLRAG VLPGDTLPIK ITINHTKQVR SAHGIIITLY RSGRIDLHPA 360
  361 IPMGSTANGK KPIYEDYYPR SRTGLGGLTL GTSRASSVFR KDLSQTFAPL IVDPTTLTAD 420
  421 IKTSIRIPED AFPTITRTPG SMINFRYYVE VVVDLRGKLT SPERFLPRFN LVSSGRNFSS 480
  481 NGKIVHPADT NGSAITANWG DNILDTDQIR REKGVVAVIF EVVIGTQDTQ RRKSEARRMS 540
  541 STAEEAEFQQ PVENSVDGDY AGHDYQGSMA GPEPGYAPLE NTAYGPDQIR WPDYPEQSEH 600
  601 EHYPFQPGTL PSPQPDEPMD EKARLRRAEQ TLLPSQPPCD PEAGPSSAVE AAMPTAPVLP 660
  661 EDDHLNDYHH LPSTTVNGMT GMAPALMSAE SVQTVIAGSS SAPLTSPSRP SEEDKQELER 720
  721 QRLMMEASAP GDPDARHNDR ADDGPSAPIF HDDDDDQQLV GGAANGDELL PRYQR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle