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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40745785, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFVEELWS SIFTAGPTPT LLLATNTTFA ALQTLLFVLL LATYSIHFVI LSILSGALWY  60
   61 SINWFAQELK QSQGQSARQE ISSEKTAETA KFTESDAKTR GTTEGADSDT ETEHVMSLNT 120
  121 GQPSESAPQS ATASTSLQVP DGSSEVRKRL SLSGDSSGYA TATSNPELDD RASKNAVRLM 180
  181 SLEMAPDSSI CAARSHIFAS VFAPASPIDF ISGLAPTAKS IQRGSSSDKG TRNRAWRPAT 240
  241 TFLSIPDRNF EDLLLHIASD EEDYLKLWNR DKKPSKETRD ALTYLIRLST KESEHEDASN 300
  301 SIFDWYELEI RRHFLQNFKE DLSIVSSASH PDGLLREKFP DVFQSISTSF DRNSLLEGFL 360
  361 VRCLLLMRRI YFTPLVQYML PVLERRAQEK CFMKFERSFH LMIRYAIPGP SLSDLITRTL 420
  421 TKHTLVILGI SSLKERADIN EDASVDDMEV DRQYSMSYQD WRAAPSVEFR SQMMTEFEDV 480
  481 QVTTARERLL SLLKNLQLVG IGGEKAQEAF AGVMDTMMTE FIRVAYTGHW EGPSVVSFHL 540
  541 RQWITDVYAQ LAIQVLPIIN VPEPAIRESD LDKWQEIGIA RLGALRVGEL FDVIVEWPAS 600
  601 SGAIEDLRQF ARHPAARHHL TQAFVAALNR RLLHPGASTV EILQVYISII RAFNLLDPKG 660
  661 VLLDRIARPI RRYLRDRDDT VNAIVGGLLA DPADADGRGS SNAETLVELA AELNKAHQNS 720
  721 LRNDTGELDF DDLNWVPDPI DAAPDYRKSK SSDVIGSLIS IFDSKETFVR ELRDMLADRL 780
  781 LQKRAEFEQE MSVLELLKLR FGDNALQACE VMLRDIFDSR RVDTVVRNDQ GMTNSQDQET 840
  841 PELHAKILSH FFWPELKGHQ FKVPSEITEL QQRYAEGFES LKQSRKLTWL NGFGQVTVEL 900
  901 DLEDRVFVEE VSTWQATVIY AFNSGTAESE SVSKTIPELS AQLDMSAALV RSACLFWVSR 960
  961 RILTEVPGQR DTFCVLESLP ATKNDNNNDT EYAAVDSTSS HTAAEIDESA VAAANAAVAK1020
 1021 ESAEAAAMEK MNLYWQFIVG MLTNQGAMPL QRIVMMLKIA VPGGFPFSNE ELREFLAGMV1080
 1081 SKGKIEIVSG GNYKIVR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle