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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67522038, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQYFFDLLY NFTDCMCCFP SSPQLKINNR SFKLLRLLGE GGFSYVYLVQ DKSTSELFAL  60
   61 KKIRCPFGQE SVSQALKEVE AYSLFTSEKN IIHSIDHCVS TESGSKFRSD GGEAGSKTVY 120
  121 ILLPYYQRGN LQDAINANLV NQTRFPEKRL MVLMLGVAQA LRAMHQYRVK SGSGPTRKAK 180
  181 AVRKEGAEAD VEMRKGKGKR RGSQPAGEED SENEPLMDDE VTQSQEGYED GNLRPYAHRD 240
  241 IKPGNIMIDD DGQSPILMDL GSLAPSPIAI TSRSLALAVQ DTAAEHSTMP YRAPELFDVK 300
  301 TGSIIDTKVD IWSLGCTLYA CLVGKSPFEA RSEETGGSLS MCVLGGDWRF PDEKSGATKG 360
  361 KGKASEQQKQ DSAASISSPV KEVVRRCLQV EPADRPDIDE LIQMLKEVIR ELPDDDVTPI 420
  421 IDRDAIPGTF TLIDENHVLT TRHLDSGDRD IVLVPEPSDD PDNPLNWSPR RKLLSTVCVS 480
  481 AYTLFAGIAS ANVYSVLTQL SEETKVSVNT LNEGTGYMFL LAGWGLLFWQ PLALQYGKRI 540
  541 TYLLSLAGMV CTSAWGYVFY SLWSNHAKVD SPYVQSNGEW IARSIITGFF LAPIEALPEV 600
  601 SVTDVYFTHE RGTYMGLYAF FLAGSNYFAP VICGFIAEYH GWRWVFYWPA IFCGAAMVVL 660
  661 FFLMEETNYA RQRPSIADRA VEVSASENDN RKDNEKDPMQ STPSTQSRSD PEVGVMYTKK 720
  721 AYMQKLSILG PHQARNNMLR RTWQTVYYLS WPVIFYAGCI LIRIIPYMVQ CLECNRFVDF 780
  781 GFCAVWLQAS AISHAALASF LDLRDNRSLF TGRFSDYLTI KLARRNAGVM EAEHRLYPFS 840
  841 LCLILVPSSL ILWGVGAAHG IHWFGLLVAM CLLAIANTAG ITLSVNYLVD SYRELSGDAM 900
  901 ATVILVRNTM SFAIGYGITP WVERLGYRDC FVSAAFVGMA CSAVFLVMVK WGKGCRVRSR 960
  961 ERYWGVVEEN WERGMGGGH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle