YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49087242, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDWVTLIVP FAYLSVLIGS LATFSSLYRK RKARKATSLE PWFPSHLQRD IYFSLLHLDP  60
   61 PASATEKKVA VPESVLKAAL LRRAQEDIRR VMTLRSQKQA LSVLLQRGSV GDDLWQRFLR 120
  121 AEKEMEDEVR DVVTEANAYA PNWGQVIFQS ANEMVNNEIV RERLDKHQKK LDEEKAWWEK 180
  181 KKASIQEGFM KELDAEKPGT VTTAAAATAA PEVAEGTQVA VGSKASASAA APPAPTVTES 240
  241 DDDAVLVEAD DQAGSAGQKS PGGGKKKKKG KK

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.82
Transmembrane Helix	7	28	0.84
Cytoplasmic	29	272	0.88