YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67523721, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFAPSISRAV ARSSAMPMPA IRSYRTISSP MTCVNARPQA EKKSIAAQQT RAASEHAIAN  60
   61 PTLAGIEKRW EALPPQEQAD LWMQLRDRMK VDWHQMTLQE KKAAYWIAFG PHGPRSQPPK 120
  121 GENLRIFFKV AQLCVVSVGL FYFIHLFAKP LPKTMSKEWQ EATNEYALRE KINPIYGVSS 180
  181 QGYEGKGFVQ SPPADKS

Type	Start	End	Confidence
Cytoplasmic	1	125	0.63
Transmembrane Helix	126	146	0.80
Non-Cytoplasmic	147	197	0.77