YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|40745267, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGSDMFLAI LAIFFPPVSV WIKVGICTAD SIINLALCCL GYVPGLIHAW YIILKNPEPD  60
   61 YDDPSYQPVP NRRGDVENGH VTYYYVSHQP APTRPQRGYG TMPSQHASDA QSPSRPPAPK 120
  121 SQHEHNTAGS SSQANEDTSP PTYAEAVKGD HKVQNHD

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.46
Transmembrane Helix	7	25	0.76
Cytoplasmic	26	31	0.37
Transmembrane Helix	32	52	0.74
Non-Cytoplasmic	53	157	0.59