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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40745047, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTPLVGTAI ITGGNGSLGS EVALAIARTQ PYVHLLLLAR DIRSESAKKV REQIRLIGPR  60
   61 SLEFVKVDLA SFNSVVSFTE ITVERVKSKE IPPVTLLINC AAMSSYTIDQ VTRDGHDPVY 120
  121 QTNAIAPFLL TVSLLEAFRA GDGTPNGGAR VINIGCSSMS KGTLDYFENP DPELSVCPGT 180
  181 PLSAKEATKR FGSSKLIMSA AMYALRRSLV LTGNISLNVY TLDPGVMTGE SHLVNAAPLS 240
  241 VKMAHQTRSG LRPFLRVFSK TAMNKASVPA KVIAKVAFQP DTVENWGRER YYILDSEYEA 300
  301 GSVIPAMRDP KEMDALLKKM LQQVEPRSQP ALRRRKQLIQ RICLIGGIAF FLLILIFPSW 360
  361 RASILPALSL GLLSSPDHLQ IQTVRYYDLA QVKGSATGWE NGDRVLMCTP LRDAASHLPM 420
  421 FFSHLRNLTY PHHLIDLAFL VSDSKDQTNE MLEHMLEELQ RDPDRDMPFG EISVIRKDFG 480
  481 QQVNQDVESR HGFAAQAGRR KLMAQARNWL LSATLRPTHS WVYWRDADVL TAPSTILEDL 540
  541 MRHDKDVIVP NVWRPLPDWL GGEQPYDLNS WQESETALAL AETLDEDAVI VEGYAEYATW 600
  601 RPHLAYLRDP YGDPDMEMEL DGVGGVSILA KAKVFRAGVH FPAFSFERHA ETEGFGKMAR 660
  661 RMGFSVVGLP HYTIWHLYEP SVDDLKHMEE MEKERRAREE EEKAQAERAQ RTETYFRDPK 720
  721 VESEIDNAFV RDSVEEEEEK AKDSTLEKDE FKAAEKDSPA TGKYMLEKGH DEDKSAAQKQ 780
  781 GAKGNVRIDE ETEN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle