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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67522543, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPRSLMRL GSGRSLASAA RSSRNCRAFS STPLQQVAKA TTAGTDTPNM RHAARPPPGP  60
   61 LRAPVVNPAD KYQDKADSLH QYGQYIMACL PKHVQQFSVW KDELCIYVPP SGIIPTFTFL 120
  121 KYHTSAEFTT VSDITAVDYP TKDQRFEVVY NLLSVRYNSR IRVKTYADEA SPVPSITGLY 180
  181 EGALWYEREV YDLFGVFFTG HPDLRRIMTD YGFDGHPLRK DFPMTGYTEL RYDEEKKRIV 240
  241 IEPLELTQAF RNFEGGTTAW EPVGAGRDRT PESFYGTIGV SMLAITAINC TEACQNLLAC 300
  301 AKPKKPPNSA NFQPPSRIAN TTNVPEDPDN IPGQDRKAIF GKMPKRKLSD LTDTNDTAQP 360
  361 QKPKLSEKEY QHLKLQTARL KQKFEFGVTS LSRALKTARG FERQKLGRRQ KVAKGGPGTE 420
  421 IAVAHAKKAK SKPKSNVSPE ETLRRIEGEI QVLKSLDPTT TAEKYLFKQL AKTKRIAESP 480
  481 VFYRFKQSKE KKIKLEGPKS TEEANVTARL FKSNPVQNVL PGIMEGLRGL FGLEGAGAKG 540
  541 KKDERDGGKR KAGEQAGGRK DVSGDESVSG SEDEDEADAR DARGLERDID MKDAESGDDE 600
  601 EDYSHFDARL ASDSEDSNDD LLSEDNDNTG SRHARRSSMS ISLSPSRSPS PSQSPPPKKP 660
  661 KSTSASKTPA TSTTFLPSLM MGGYWSGSES EPEELEEAPK RKNRMGQQAR RALWEKKYGA 720
  721 AANHIKAEQQ KGQKGKGKGG RDAGWDLRKG ATGDGDRDRD RGRKKFGTGS NAMAMSGKDR 780
  781 FGSGTSTAKE RTTQGAKSKK TKPQDDKPLH PSWEAARKAK EQKATASFQG KKVVFD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle