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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49088100, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.93
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIIYILALA IAALSVGSAA SNYHENLLLQ PLPPSSLLAS FNFRSNATQT SFQQQHFRYF  60
   61 PRALGQILQH ANTRELHLRF TTGRWDSESW GSRPWDGAKE GGTGVELWAW IEAADDEIAF 120
  121 SKWITLTQSL SGLFCASLNF IDSTRTTRPV ASFEATGHHV DSDNLHLLHG TLPGEVVCTE 180
  181 NLTPFLKLLP CKGKAGVASL LDGHKLFDAA WQSMAIDVRP VCPSSGECLM QIDQTVDIVM 240
  241 DIERSKRPRV PADKLVCDTS KSYHARDTCY PLETTAAKSW SISELFGRTV SGSCPLMDTQ 300
  301 EKTVCLRVPP TQEVRPSPEL VNARFYDQFT RCYTPPSSEP FDLDVPEQAA INITSSVPLE 360
  361 EPVLHAERTI VGHGQERGGM RIIFDNPSSE KPVDFIYFES LPWFLRPYIH TLQSTITGPD 420
  421 GVRRQAPTTD FIRETFYRPG VDRERGTQLE LALSVPPAST VTLTYDFEKA ILRYTEYPPD 480
  481 ANRGFNVAPA VIKIAASKPI YIRTTSLLLP LPTPDFSMPY NVIILTSTVI ALAFGSIFNL 540
  541 LVRRFVTVEE AAALRAQTFK GRLGGKIVAL RDRIRGKSAK VE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle