YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49089302, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQRITYIQK PSLPFHPSQT TLTRDSLYVE SLDAAREERV TFSFDELPSE LWQVLRQCHQ  60
   61 LHIRWASERA FEAVSPLSSR ISPGLHVFYS PVEAGRAKRD SEGSISHALT MSGFWSQAPG 120
  121 EQGWTETIGK HEGGTDKVEI GLLGAEPASE PEEIKVGGLL AVVGQDEELK PTLFSFPSRH 180
  181 HPLHEDATYS VTFPPPTGLH PTMTISIAPE ALKEPPRRPD ATCALHAYLT LPSKLFGDKY 240
  241 QLSTTDPLFL KSHNLASLRA VAGETDLEAP DWSISRWGSN WLLELASPSE SDEVAEEWNI 300
  301 TIPLHLRYLP PSESGYQPAS VPWPVVFWAC SAEDGTKMGV NPFDRINLGW EGLFGPRTMF 360
  361 YQLHPSPSPE GGNLVEELEV PVLTLKENSG IFNSQVIELG TFAVISIGFL WVLWKLGLVA 420
  421 RSSGIRPQHQ RNPGKRDKAE

Type	Start	End	Confidence
Non-Cytoplasmic	1	398	0.97
Transmembrane Helix	399	418	0.89
Cytoplasmic	419	440	0.91