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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40744643, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLLIVLGL VSTVSWFIRY RFLNMYSRLP PEPQRKEPQL DLFPDVQEGD SKPGLANYLD  60
   61 EFLSAIKVFG YLERPVFHEL TRTMQTRKLI AGETLQLEEE KGFCLVVDGL VQIFVKSMRS 120
  121 GKHGLNGEVI EGSSDEDDQA RDGKQGYQLL TEVKNGASMS SLFSILSLFT EDIRLRASEG 180
  181 SSSSMSSVQP SPARTTPAPF LDSPGEMLNG SPMVLPRDSE VDSSAINGEA EPLPPVPPLH 240
  241 LGESRASSYH PNGQSTASER VRGNRRKSVH PDIVARAMVD TTIAIIPASA FRRLTRLYPR 300
  301 ATAHIVQVIL TRLQRVTFAT AHSYLGLTNE VLGIEKQMTK FTTYDLPNDI RGAALDRLKD 360
  361 KFLKEKDRLG SEEVTRGIAL HNPYAGRRRR SMSFVRKEAA LKAKMPLPKR PNSLINPERP 420
  421 FHGYDTAGVS PGDLLSTIQL SRFGPRHDQF ATTPRLHSPL TEKERSPLRR SSLQRKDSVD 480
  481 EDALFRESIL DCIMKGIGLT PSSHNALRKG SHSGELSPKL VSYDSRRQKA VFSNNAFGFI 540
  541 DAYEGSGDGD TESMMSMSVT SAGGTSPIVY LREDLLNDIE IVYFPKGAVL VEQGERHPGL 600
  601 YYVIDGFLDV GVQVNEKGDD LVGASRPGHA QPDEELFPTL KRTQTATSRG ATAAAPINES 660
  661 KRKKPSRKSL YMIKPGGMQG YVGAMASYRS YTDVVAKTDV YVGFLPRASL ERLAERYPIA 720
  721 LLTLAKRLTG LLPRLLLHID FALEWVQVNA GQVIYHQGDE SDAIYITLNG RLRSVHEGKG 780
  781 GKMTVVGEHG QGESVGELEV MTESTRPATL HAIRDTELAK FPRSLFNSLA QEHTGITIQV 840
  841 SKLIAQRMRD LVENPMTEQG EPGNTGSVKT ATSTLNLRTV GILPITTGVP VVEFGNRLLS 900
  901 ALQQIGVTDG VTSLNQAAIL NHLGRHAFSR MGKLKLSQYL ADLEEKYGMV LYIADTNVNS 960
  961 PWTQTCISQA DCILLVGLAE SSPNVGEYER FLLGMKTTAR KELVLLHADR YCPPGLTRKW1020
 1021 LKNRVWINGG HHHIQMAFRL TAEPSHPQTK RLGTVLKQRV QILQAEIQKY TSRRIRQTPI1080
 1081 YSAQTPFKGD FHRLARRLCG RAVGLVLGGG GARGIAHVGV IKALEEAGIP VDIVGGTSIG1140
 1141 AFIGGLYARD ADVVPMYGRA KKFAGRMGSI WRFALDLTYP SVSYTTGHEF NRGIFKTFGD1200
 1201 SQIEDFWLEF YCNTTNISRS RAEYHSSGYV WRYVRASMSL AGLLPPICDE GSMLLDGGYI1260
 1261 DNLTVAHMKT LGADVIFAID VGSIDDNTPQ GYGDSLSGMW SVINRWNPFS SIPNPPTLSE1320
 1321 IQARLAYVSS IDNLERAKNI PGCLYMRPPI DRYGTLEFGN FDEIYQVGYA YGKEYLQKLK1380
 1381 SQGSLPLPEE NEEKKKLQRT LAPRRASI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle