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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49091640, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRRTLGGGR ILGSANTRTT ATLSSPQIRP NNILSPSAST LSLNSQASAS QLSSETQDLT  60
   61 SRISLDNGSA PLPAAPAATG AQLSCPICSE EMVTLLQLNR HLDDVHHNLE DDRQDEVKDW 120
  121 FKTQMEKAKR FQPLAVLNQK LKGLDVFESN ENHQALTGAS RPSGLSQNHQ SQSFLHEAQP 180
  181 RPPDPEEIIT KEHWQPRGFY DTCLEPSCGQ RLNATNGCVN CRKCGKLFCE EHTMYQMKLS 240
  241 RSAQHEPVRG LWYRVCETCY KSREGYNDHN GLVRDRMDEF KAIRKPIVDK SLLEVSRLEK 300
  301 RLTRLTQLLA SLSPEQLQSN KLWPIPFQHD ERKALEQTVV SWQDDTSVTR CPFCQQDFSS 360
  361 YTFRRHHCRT CGRVVCGDVL TGCSVEVPLS VTPLSKAYLE KSVNVGSLNI DIRLCKECKS 420
  421 TLFDRSDFEA DVARKPADVR AYENLRQFER GIRLLMPKFQ KLLTTLQNPR RPPSAAQLAE 480
  481 ASKVRKRLTD SFTQYDTAAR RIRDLPTNST TQQRLQKAIY QQATNFLHLH MLPLKTLPKI 540
  541 LKHATPDGSQ PSSSSSPDSP GGASVEGHRR QNSALAAVKS GKVAASISNS SIASEASSAV 600
  601 SALEAEEKAL RERLIVLEEQ KFFVSEMIAD ANRRRKFDEV SSLAMNIEDL SREIDRVNGL 660
  661 LDGLDFEGAY MGNHT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle