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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40744364, gi|...
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSTVSALQA RLKELSTSVA QIHPLVSRLH NFTTAVGQGD DARLELGAVI HSRLKDAEDE  60
   61 LELIKDDVDD LESTTDSRRR GAGLEKETEK ERVIALARRL ANDLKRTRGD FRNAQLQAKR 120
  121 NAELAKRKER ELLFARSAGG TEKRNPAKEK LTQEDIVKNA SKDVTAALRR THQLMQAELS 180
  181 RSQFAQETLE QSGAALSSLS ESYTNLNTLL SSSRNLVGSL LRSQKSDTWY LETAFYILVG 240
  241 TISWLVFRRL LYGPLWWIVW MPFKLILRSV FGVAGAIGVT SKAVQSSVAI GTDGVAQETL 300
  301 ALNHIPEAKA HVVGDTVPDD VPGTDAADLD WVMDKIGEIV EENTDQEGAN LDDFSLEELQ 360
  361 RQEDMPSNTK KRINKARAAA AFSSSKQKPT EGKEEQSRLQ PWVEKYRPKT LDDVAAQDHT 420
  421 TKTWARTNQA ALQLPHMLFY GPPGTGKTST ILALAKSLFG PALYRSRILE LNASDERGIG 480
  481 IVREKVKGFA RVQLSHPTGL DAEYFEKYPC PPFKIIILDE ADSMTQDAQS ALRRTMEQYS 540
  541 RITRFCLVCN YVTRIIEPLA SRCSKFRFKP LDNSAAGDRL AQIAQLEKLS LENGVVDKLI 600
  601 SCSDGDLRRA ITYLQSAARL VGAAKAAKDG DEDEEMKDQG SDMITVSTIE EIAGVVPESV 660
  661 LDGLIQSLQP KRMGSPYEAV SKVVTEIVAD GWSATQILLQ LYRRMVYNDA IPDIQKNKIV 720
  721 LVFSEMDKRL VDGADEHLSI LDVALKISGI LGGT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle