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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40744334, gi|...
Protein type: Transmembrane
Type Confidence: 0.67
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVSMRSARL VRSNPVLRPN SIARQRYAGA FGAAATGLRF NSRNFPSQVT ALAILVPKRG  60
   61 YATEQSTNTS GPSNLPPPGF NAEQAKKPIS VDQAQPASAK ANQDTIPKGE VSVQSQNAQS 120
  121 TSKESGLASK SVAEDKDKKA VEEPKKESKK LTIGQKIKKE IQHYWDGTKL LATEVRISSR 180
  181 LALKMAGGYE LSRREHRQLK RTVTDLGRLI PFSMFVIIPF AELLLPVALK LFPNLLPSTY 240
  241 EGKSAREKKA LSLSSTRKEV STFLKNTLKE SGLPVTAASV KNDEFAEFFK KIRSTGETPS 300
  301 AEDVIKVCKI FKDDLTLDNL SRPQLVGICK YMNLNTFGTD AMLRYNIRHR MRQIKRDDRA 360
  361 IFYEGIDSLS VPELQMACAS RGIRTHGVSP ARLRDDLSQW LDLRLKQGVP STLLVLSNAY 420
  421 VYAQGGKEAE MSSQIESLQA VLSSIPEELF HEIELEVHNA EGAATNKQRL EVIKEQQELI 480
  481 EEENQQNSEN EEKGVAAPKD TENIDEDHKY ETTQSGEASE AMQEGEKAEK DAEPAVQEKK 540
  541 DTK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle