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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67525837, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLGNIIYFA FHPSELRSII QWKVWHNPVH ERNEKNETET QKACFKFLDL TSRSFSAVIK  60
   61 ELHPELLLPV CVFYLALRGL DTIEDDTSIP LETKEPLLRN FKDFLEQDGW TFDGNRPEEK 120
  121 DRELLVQFHN VVTEFRNMKP AYQVIIKDIT DKMGNGMADY ARKATFEDAS VKTVEEYDLY 180
  181 CYYVAGLVGE GLTRLFVEAE FGNPALLKRT RLHKSMGLFL QKTNIIRDIR EDEDDGRRFW 240
  241 PKSIWSKHVD NFEDLFKPEN REAALNCNSE MVLNALEHVE DCLFYLAGLR EQSVFNFCAI 300
  301 PQAMAIATLE LCFRNYTMFE RNIKITKGDA CQLMTESTQN LRVLCDVFRR YVRRIHKKNT 360
  361 PKDPNFLKIS IVCGKIEKFI ETIFPSQDAD AAKRRVEGTL SEAEAEKARQ DAETRKDVLF 420
  421 MMGLMGVMAL IVTAIMALVF VESDWQGLQI ALLALQAFLY IDPGFRKSIY LFPDSYRQLQ 480
  481 FLSFRTHHSP ENNLMDQQSQ SESLPNMEPL SPADFRIYNR LAEQMENIHN GFRATWAELK 540
  541 TACDPPPSQS QFPTPSALAA GNPDSTDSEI ILLGLSFCSG LSSHHSIEER YIFPLLAERM 600
  601 PEFAAGGVLT EQHEVIHDGL TRLGAYLRSC ERKLDDDEDG WRLDRGVLRR LLEGEDGKFE 660
  661 SVIWEHLDQE VELLRPESLR RMWGVEDVRR FAI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle