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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67525699, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRLQLSSGL KAIALLTFAA TATCWPYDES LVDYNVNTNK SATNPADYWG EWSDHKYHPS  60
   61 PENWRFPFYT LFMDRFVNGD PTNDNINGTT FEHDLNSNQM RHGGDVAGLV DTLDYLQGMG 120
  121 IKGLYLAGTP LMNQPWGSDG YSALDTTLLD QHFGTIQVWR DAITEIHKRG MYVLFDNTIA 180
  181 TLGDLIGFEG HLNDTTPFSE KEHKALWKSN RRYVDFDIGN TYNATCDYPR FWYEDGMPVN 240
  241 ESLTAGLVGC YDSDFDQYGD IEAFGVWPDW KRQLAKFASV QDRLREWYPP VRERLIRHTC 300
  301 MIIASFDIDG IRYDKATQAT VDALGDMSKA YRECARAVGK ENFFIAGEIT GGNTFGSIYL 360
  361 GRGRQSNQVD SVGNIYDAMK LTNESDPQLF LREVGHEAID AGAFHYSTYR ALTRFLGMDG 420
  421 QLEAGYDVPL DWVQAWGNMT VTNDLINANT GKFDPRHMYG VTNQDVFRWP AIEWGVERQM 480
  481 LGSFITTLML PGIPLLLWGE EQAFYVLDAT ASNYIYGRQA MSSATAWKTH GCFSLESSQY 540
  541 YQWPLVAALD GCNDETVTYD HRDPSHPVRN IIKHMYQMRE QYPMLNDGFI IETLSNQTEP 600
  601 VYYPGSNGTE TETGMWSVRR DRNEETQDFG SSDDNEPIWL VYSNMNRTHD YTFDCSDNET 660
  661 ALIAAFPSGT KVRNLFHPYD TLTLGDGPKE MVYGNSTELV GCLPNLTLSR YEFRAYVKNE 720
  721 LWKKPRPMIT KFQPGDDEAN GHDSPLRSTV APDASETVRL TLQFSEAMGC DSVTDSISFN 780
  781 SSTETGKIPS IDASTVQCGN ITEVANSNAT GHIPGKWQWA ADLRGVYNGI HRVTVNNASN 840
  841 ADGDDSTHAV DHFLFRIGQI DNPMVFTSAN YSSSLLHEKE DGTFYIQHHA AGADKYRYST 900
  901 NWGTTFSDWK TYKGGNDTIT MLPWNGTKAQ EWEGHHIRVE YWSRWTGSSS HVQEGDSGWK 960
  961 YKTPRRFPHA FFNGPYNQYG YDGGLDNQIK LDAGAGGDGY WKYHFTSEWP AVGQVNVWGI1020
 1021 NPDGEPDQSW VMGDVDGDKV LDRMPPSALS ATLINITDHP THPYISWKLY INDATMRYYL1080
 1081 IPAGHQSGQI AMFVLFWIIP LLSGSACVYI FMKSFYKVKF NEIGAAGAST EMKSLVPLAL1140
 1141 RRRMKQLASG NGKNGPSFNP LMRLAEKSGF MQSTTALAGA ASGKRRMVLI ATMEYDIEDW1200
 1201 GIKIKIGGLG VMAQLMGKTL GHQDLIWVVP CVGGVDYPVD TPAEPMTVTI LGQAYQVNVQ1260
 1261 YHVLKNITYV LLDAPVFRQQ TKSEPYPARM DDLDSAVYYS AWNQCIAEAI KRFPVDLYHI1320
 1321 NDYHGSVAPL YLLPGTIPAC LSLHNAEFQG LWPMRTQKEK EEVCSVFNLD VEVVRNYVQF1380
 1381 GEVFNLLHAG ASYLRVHQQG FGAVGVSKKY GKRSYARYPI FWGLRKIGNL PNPDPSDVGE1440
 1441 WTKEDSLIKD EDIKVDPEFE AGRAELKRQA QEWAGLDQNP DADLLVFVGR WSMQKGVDLI1500
 1501 ADVMPAVLEA RPNVQLICVG PVIDLYGRFA ALKLDRMMKV YPGRVFSRPE FTALPPYIFS1560
 1561 GAEFALIPSR DEPFGLVAVE FGRKGALGIG ARVGGLGQMP GWWYNVESVS TSHLLMQFKL1620
 1621 AIEAALSSKT ETRAMMRARS AKQRFPVAQW VEDLEILQST AIQVHEKEVS RGHAGGRPMT1680
 1681 PMTPSGATTP SGMMTPTTGS RGLKPLSQGV GMGLSVPHSR ESSYSNLNRL SEYVAQKTPG1740
 1741 ESQPRESSGL QRSLSLGVRS GPGHRGRARK QKPGADNIPE GNEDGSSSDT ESIPDYYDDE1800
 1801 YTLTPAQIEE SRRAQATRSI SFSPETLQPP RSPLPAPPMS PGTPPSVEQT LLPPPKPFAA1860
 1861 ADAGNRLSSA SVLSLDSVVG GKKDFKLQKV DPFFTDSNGE YARNFEQQLE NLNGSNSESQ1920
 1921 LCIEEFLVKS ERRWFNKFRD ARLGRLRSPT PSVFRDNHSH GRGSPDGSMY VDEAGHRNSG1980
 1981 DAVHDNGSDD TDDEFLLGKD YVPPTGLKKW MQIKIGDWPV YTLFLALGQI IAANSYQITL2040
 2041 LTGEVGQTAE KLYGIATTYA ITSALWWLVF RYFKSIVCLS TPWFLYGIAF LFIGSAHFES2100
 2101 DSFTRGWIQN VGSGFYAAAS SSGSIFFALN FGDEGGAPVS KWIFRACVIQ GIQQVYVIVL2160
 2161 WYWGSTMAHQ SSQGLLTADN TISNTWKMTA ICYPIAMLLW AIGLLLIFGL PNYYRQKPGK2220
 2221 VPSFYKSLFR RKIVLWNFVA VILQNFFLSA PYGRNWSFLW TSSHTKPWQI VILCVIFFGL2280
 2281 LWCAFLYIVA VLSKQHSWFL PVFACGLGAP RFLQIWWGVS GIGHYLPWVA GGYTGGALVS2340
 2341 RSIWLWLGVL DSIQGLGFGI ILLQTLTRMH MCFTLIVSQV LGSIATIVAR ACAPNNVGPG2400
 2401 PVSPDITKGA GELANAWFWV ALFCQLLVCA GFLLFFRKEQ LAKP

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