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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49091930, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSCDGASPN CHFTCPRGSK WYACSDEPHF VGCCTSAPCN NATSSTCPQS DIRPASFDGA  60
   61 LFDRIRPNNC INSRPDYWFT CNFTDPPFLG CCAINPCANG SCPLEELIPA AWSANDPDQY 120
  121 DLFSDKKPTT NSTAHLSSGE IAGIAVGSVA VFVVILVALF LLIRWRRRRK KLPSSPQPSK 180
  181 VSGDCAGSRK HAVRMHEPTQ ELLEDAQGGL EDVDDGNLVI QDTSSSASTM YEVTREQSVA 240
  241 LRISNWFILE ILATVVSAGA LITLVSVLAI YDGKPQPDWY YMSLNSFISW LSTISKACIL 300
  301 FYVSEALGQS KWVWFAQKVQ PIRHIRTFDS ASRGPYGALE LIWTLRGRHF AVVGSLAVTL 360
  361 ALAFDPFAQN LVQYYEGKVT DTSNNATISS TSYYGNYGGL FQADAFSVEY ALKTNVYNVF 420
  421 FSRDTETPWS IPRYGCSSTN CTWDLVVSLD ARALCANITE HLTQSCKYTS VETDSRTGEV 480
  481 LNCTASLPKS HIDAWALPYD PESDVAQAVG FVVKAADSSQ AIIYTNATTS AIQFVEPLMT 540
  541 YHGSPVGLRW EATECTIEPV VRSFRASVKN NNYSEETVKI WPDRTLVKMN YTDDPDYLDT 600
  601 YPDFAYTNDT DYQWHFYPPW PGELAHLNPP HNKVFNYTLS AEKAIGKFLR TILTGYYWQN 660
  661 TTGYGYTPTE PDAALYASQD VLQAFHREGR KSCSDVSCNV EPGRFNRTMS NIAQAISKTF 720
  721 RDSQDTTYGR SEVTVTHIAV RWQWISLPIF IWLLGTIALF GTVWKTRQKR APRWKNDPLP 780
  781 LLFLYTDGPK QDDGLDGPKE RRITDINTLK VKLHGARSHE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle