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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67524599, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLFNSFLFV YLLGGFTFLP LVLSLFLLYS YLVLPPSSPQ SERVSDSADT SIHRPNDDQF  60
   61 SLKSGTDELA EEFYRTHDTD VAAGYFVVCR EYVPGGINGK PPERTTPAGE VVGPESPSVY 120
  121 QTMYRSLFDR KQSPTIEPAK NMARNGKRTR NMFYIVLRHG HLMLYDDADQ VEVRYVISLA 180
  181 HHDVSIYGGE GEIPEGELWL KRNAISLSRR LDSLGDLGGP TPPFFFFSEN LSDKEDFYFA 240
  241 MLQNQSKMVH FPKGPPKHQD IDVKHIVTLV QRLHSSEEQL QTRWINAVLG RMFLALYRTP 300
  301 EVEEFVRTKI VKKISRVNKP NFISKIGLRS IDMGNGAPFI INPRLKDLTV DGNCCVETDV 360
  361 QYTGSFRVEI TATVRIDLGQ RFKAREVDIV LAVVLKKLEG HMLIRLKPPP SNRAWISFES 420
  421 MPNMDMDIEP IVSSKQITYG IILRTIESKI REMVAESIVL PFWDDVPFLD TMAQRFRGGI 480
  481 WQRDSSEPGS TVEIPDESGS RPQVPESSGT VKASKPADDR TMSAPALSES ATNTATRRKK 540
  541 SEASEMLDKG SSTALSSPVG KNPNSPPRAI RSRTFSHTAD PVLTADHGQV DAILSDFKTD 600
  601 EKGNATSSMI EISRRSPLVT PSKTPGSSPP SDHQSLSDIV HPGCESFNAS SVGNLGETSS 660
  661 DPFKSPSSTQ AVHSALDMRD AASQSSSSLN SNKTRRSSTL DSSAVSSASH ISSDKKFQSS 720
  721 LSLGAATSIA KKWGLNMFGS KESHTNSGVG LSRPAGTPEE PIGRGHPFPP PGIPLPTPAK 780
  781 VNNKRNSVSV PKRKPVPSTS LQEEMTLDGN GRNQLPSKFP PSRRKTVLDF DVDAARSDEL 840
  841 LVVEPPYDST PNSPADFTPA SGLPDQRRFA TKEPRDLAQV DTKVETRQNH AEEHSTMDRL 900
  901 SALDRSENKE RNPTKPPATD NCLLEKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle