YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67525529, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTRYRVEFS PKRPAVQGLL AVPFVLHSQP TAVQEEDATK LAAVAHDTHQ RYAEIFSDVE  60
   61 RLLNDHIDHE LSGAAGKSKL KLLVPTVGTF FTRLYLREAF DYQDRQRFIS RRRFVAPSFN 120
  121 DVRLILNSAQ LLGLVHTKGL ELVTFDGDVT LYDDGANLNA DSPVIPRIIR LLQQGIKVGI 180
  181 VTAAGYTDEA KYYERLQGLL DVMRDASDLT DEQRSALIVM GGESNYLFRY DASSPHRLTY 240
  241 VPRENWVIGE MATWEEEDIT QLLNIAESSL RACVANLNLP VSVLRKDRAV GVFPKNRGRL 300
  301 SREQLEETVL VVQNTVERSQ VGSRLPFCAF NGCSPFFVSH YLRHHPPRRK YKPPIQPCML 360
  361 ISITQPGGND VFVDIGDKSW GVRACQQYFG GIDPSRTLHV GDQFLSAGAN DFKARLASTT 420
  421 AWIASPAETV QLLDELDTIQ KVLA

Type	Start	End	Confidence
Signal Peptide	1	28	0.76
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	444	0.97