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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49096926, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGIFGRKLY TTFWKTASPF LGRGLRVTRA ENLSHTASQI DSLYKSILKQ YAKKLPTAPP  60
   61 RKTNQITRRF ASGSCLILGV SPSSTVVETG TTCAVSSEKI ISHRLSPFNR WFPHVLSRNV 120
  121 QTRGFQTNKD DVSRAGARTD AADRAGVKNV ETEGKHQKSE EQSFRPGEKH EPAPPNRPLI 180
  181 HRLPHMPHLH RPTKEELLAA ATGFWSRLKV RFKWFSIRSV RPFNLDEIAA LFSWVILGHI 240
  241 VWIVLGTTTF FSLLILAINT VFAQETLAGW IGNYLTKSSG VKVVFESAIV PKWRDGVITF 300
  301 KNVFVSRRPG QGTGHVSKGS SKTAAAAAAA AHLGDQSGAD LLEQRISSEE EEDTNYTQFD 360
  361 LSIETVNVTL SFGRWINGKG LLRDVEVKGV RGVVDRRSVF WPDEPRDPKS YRHEHNPGDF 420
  421 EIDSFKMSDL LVTVYQPNNF RPFSLRKQWL FYDFLSANMM SGSFDNSLFT IHPRQTHSFT 480
  481 GAQLGNEAEE DGKPTPWKKH SRIRIDGLNI DHLNRGVQGP FGWIHEGTVD IVADIMFPAD 540
  541 NDESIAKVMA DLYDRLEATV TSNRYTEDSN FHDLTHIDES KSSDSRRFLV TDLRLHLNNV 600
  601 RAVVPLFTRD LSYINNALIR PIVAYINSRR TFIPVNCRLV KRAADFDGSW TIYDSGLMDD 660
  661 LSAAVYDAFA RDVVDEQARK RRFKKVGFWS LQLAAQAIFM GMAGNIA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle