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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67539206, gi|...
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPQKSVAEL PRSVLPRLTW NASSTRTSLT ASHSAPLSAG RRQSPQGWIT FTWQTQSQVF  60
   61 SQSVATFSTV SRSFTSTSIA QRFPHSISHK TKSQSTQPVG APIRHNGVYV ATFKPARRAF 120
  121 HASAPRKRDH HFDTLKFVQR LKDEGFSEEQ AVAMMRVLND VIQESIQNLT RTMVLREDTE 180
  181 RSAYTQKVDF AKLRSELLNA DSTEAQLIRS SHEKIAADLA KLNSRLRDEI GRTQASVRLD 240
  241 LNLEKGRIRE EANSQEMRIK ETETRIEQEV AGLRERVEAV KFSTLQWLMG VCTGTAALIL 300
  301 GAWRLLICRN VYAIHNRVVK AEDGAWVLIL GFLNAFATHF WQENCTSKCA RCYEGKSEFR 360
  361 GIYALRAGVI ATHLNHASDQ HRTPLATDNE EGLVQGCELE RNCNHYNVDD RADKGSARLV 420
  421 PVKGEIVETR FQFRLLRRPE APRGTVLINA MLFVLWAALW LCSRLISPSS AVLEVFEVYQ 480
  481 PVSSQNHNDT SCNEEILLLN HVFGYSYGQP FVGKTIWSHW SMHSCEFDTV RINLTVTSKG 540
  541 RQFDRLAHLW LGDIEVFRTS TAEPTADGII WSYVKDLSQY KVLWQEPQKL IFDLGNLIDD 600
  601 TYTGSFNVTL MARFSHEKNV RLADIVLPIS TRSSVLNLSS AFNIPSQRAE VSYRFDSRVS 660
  661 RALVSISACG QSTEEFWWSN VFSSDTRTFD STVGELYGHS PFREIQLHID GILAGVVWPF 720
  721 PIIFTGGVSP GFWRPIVGID AFDLRMPEID ISPFLPLLTD GSYHSIEVRV VGLDISLNGT 780
  781 ATFSNEVGSY WAVSGNIFLY LSDGSAEQLP TSAGPGQRPD IVAPTPTFTT TRYLEQNSIG 840
  841 GNSSLKYSVL AERFIAIRSP DFLWSQNLSF SNVGLFNQQG LSQKNVQRTS ATILFGPLGV 900
  901 GDDVDELSFD YPLTVNTTYG DLDGGLTIDA WMRRGLRIDS SGVPGISTYT FTSGPLHLDI 960
  961 SQCGQSSYQS TADNSNSTSS GDTRTVIRSD AGAIAYRRTP LVETLPRTWV GLDGLVLSLS1020
 1021 PGAVTDTLAH TFKRCKESQS GEPLTKRRKT NPKAQSLRDI QARCCLQLDF AHASPLQGDW1080
 1081 SDFTGTEHNL PVIIKFSRPH PMETQESGND CVVLEIETIQ ERETIFVDTS SDPDIISLGR1140
 1141 HLAIASDLAC ADRYHTAKLP TACYQSTLRC FGNHTSFQLE TVILWRDSLD ITDYQRLPDA1200
 1201 ASAAFFRYVL GEDKDYDPFR IRRTRGPIAR GDGWTPQDFY DNVHVPRNTP ELSAPVKCDL1260
 1261 TECELFPFQR RAVRWLLNRE GKELNSNGQV VPLENRSKIG LPDSFQQITD ADGKGGVLAE1320
 1321 EMGLGKTVEM ISLMCLNRRI LRPEETFAEP GSNGLRPSGA TLIITPPVIL GQWKQEIELH1380
 1381 APKLQVFHYT GIQRHPTLSD QELVELMADN DVVLTTYNVL AREIHYAGVA PKRNLRHEKR1440
 1441 FEPRKSPLIK ISWWRVCLDE AQMIESGISN AAKVARLIPR HIAWAVTGTP LRKDVTDLLG1500
 1501 LLLFLRYEPF CGPIWKRLCD ATFKPVLARI VNTITLRHSK NFIREELHLP PQKRIVITVP1560
 1561 FTAVEEQSYR QLYEEMCEDC GLDSSGSPRN NDWNPNDPSV IDRMRSWLVR LRQSCLYPTG1620
 1621 NRRKVFAAGN GPLRSVNDVL EVMIDQNDAL IHAEERSLLL SQLRRGQLLE NAKLKREALS1680
 1681 LWKNSLHRAS DTVQQCRERL QTERKKQLTP LANGAHDERL SFSDDESEET EKNSRLHVFR1740
 1741 QRLRTALEVE HIAVFFTGNA YFQIKSDHEL TKPDSEEFQA LTKLEEEAYA KAKLIRQEML1800
 1801 TEISRKAKHY VKRIKEKAEK KDFVAIPEMK LHMYSKGLES RRVFERLQDF CDMMNDHAAQ1860
 1861 YKEWREKMVK LLSQALIDQE DESELEGDEY EKSTKHQDEM YVYMEALRAL FADRHDALTG1920
 1921 QKNVLIAHEV KVAISQAQKG EGPSPTLYLE VMKRRNEVKP GPDLGSLRGA IAELRSLGSS1980
 1981 LEWQANDGST RARAELEILT KVLKNVTDIS TEQTKIASNL EREVEMFRDT MNNRLEYYRQ2040
 2041 LQQISDTVAP YDEESTGKPL DRGLFAEKLE QEKAMEEKIS SLKAKGRYLI HLRDETSPDE2100
 2101 NSKICIICQG TFEIGTLHEI KNIDLKDSFG TKIDTLARHI LWLREHDPGA QSIVFSQYKG2160
 2161 FLDYLANAFR RFKIGYSSVD ESDGIEKFKK DPGIECFLLH AKAHSSGLNL VNATHVFLCE2220
 2221 PLINTAIELQ AIARVHRIGQ HRPTTVWMYL ISDTVEKSIY DISVSRRLDH IIQKEREQKA2280
 2281 GAPTAPENRV NRPAIGDLSE VAIDSANSME VQDAPLAKLM EGGAYGGERV KKDDLWQCLF2340
 2341 GNPRRQQHMN DSSSANSDVA RFLRAEAAEQ RRTSSKGGE

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