YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49096426, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANSPVAVVC VGMAGSGKTT FMQRINSHLH SKKQPPYVLN LDPAVHTVPF ESNIDIRDAI  60
   61 NYKEVMKQYN LGPNGGILTS LNLYATKVDQ IIALLEKRAA PNPENPAAKP IKHFLVDTPG 120
  121 QIEVFVWSAS GSILLETLAS SFPTVIAYII DTPRTSSTST FMSNMLYACS ILYKTKLPMI 180
  181 LVFNKTDVQD AEFAKEWMTD FDAFQQALRE EEESGQFGGE GGAGGMGGSG YMGSLLNSMS 240
  241 LMLEEFYRHL NVVGVSAMTG EGVDEFFEAV EEKRKEFERD YKPELERLKK EREEAQAKQR 300
  301 EIELGKLMKD MNLSSSKAKE EPETVSEAEE EEDERVAAMG RAYDPDSDSD EDYPPPAGDD 360
  361 EGLSQRYQSA LADSRSGPSN EDASFMRYLQ QSNLNG

Type	Start	End	Confidence
Signal Peptide	1	17	0.63
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	396	0.96