YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|40743345, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAEFQTALS TFESRLNSLV TSLTTSPTAS GAPKAAQELL NADDSLTSTI DTLKQHQSNY  60
   61 ARILQLRAEA QSLEDKVKDI VRLVVRYEKD IREACGDSDS DSDTDYDSEE SDHDMNAPHT 120
  121 TQTRTSRKRN EVDYRLLLDF ARRISKYNHE AAADAAAGMA KGNHVLAGRD TEMTGVNTNG 180
  181 NQEGSPAEPV AAVTKEATSW LDESANMTRQ VYMLPYPMED RIRMGLMGQI QLAAAEGRPG 240
  241 FDPDKEVERL IREAEGVGIA DAVAPPPIGE EATRVNEAAM AAAHAGSTAS GGRMAPVQPK 300
  301 PKATLDLDLY DPDEDED

Type	Start	End	Confidence
Signal Peptide	1	31	0.65
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	317	0.99