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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49095720, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVTRSQTGR TPRKVDRPGF VETPGSRRVT RSSVAPSDEA TDTPSETKGR TRSTTRRRTT  60
   61 RVKSEEASES EETKLSVANG HANGQVNGKT NDQANAHANG HTKERVIDGW VEGKDPKVDY 120
  121 SGHFEFGGSP GVLAMMIGFP LLMYYMWIGA TYYDGKFPRP SEGQSMSEFF AHMGHLVYDG 180
  181 AFPTLKAWTM YWVFFIFEGL LYLLAPGITV MGRPLPHLGG KQLPYYCSAL WSFWTTLAVA 240
  241 CTLHFTGVFK LYTIIDEFGS LMSVAILSGF LVSFVAYFSA LARGAQHRMT GYPIYDFFMG 300
  301 AELNPRMFGI LDFKMFFEVR LPWYILLLVT MGTAARQYEV YGYVSGEVGF LFMAHFLYAN 360
  361 ACSKGEECIV STWDMYYEKW GFMLIFWNLA GVPLSYCHCT IYLANHDPAT YHWNRYFLVF 420
  421 LYVAYLFVYW VWDTTNSQKN RYRQMERGTR VFRKAFPQLP WQTLHNPKTI TAADGSKILV 480
  481 DGWYGKARKI HYTCDLYFAL NWGLITGFNS PFPWFYPVFF ACMISHRALR DIQRCRNKYG 540
  541 EAWAEYERQV PYLFIPVIAD GNGSMRRAFL NLLYPAIKLK ALAGIYVFHP SIPGYPNARF 600
  601 PGVVVFSEIY QVTGPVARFA RQIAGQGYIV ACPSSYHEFT GPEALSYNAE DTDKGNEWKV 660
  661 SKKLSAYDED ASLSVSYLIS LPTCTGRIGA TGMCLGGHLA YRCALDERVK AAVCYFATDI 720
  721 HSHTLGKGKN DDSLARAGDI KGELVMIFGK NDTHVPPEGR DLIRSTLHEK GVLFSFYEVA 780
  781 WAQHAFIRDE LSKGRYDPAI SKVEASKANL IRSGQLRPKL ALRIQCILSL ALSCTEYDPT 840
  841 AISYVQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle